The database will get courrupted and go into an loop where it boots and crashes. Something it causeing the tables to get corrupted, but I am unable to figure out the problem. The server is running in a jailed FREEBSD enviorment. Part of the log I believe is relavant:
131012 22:52:57 mysqld_safe mysqld restarted
131012 22:52:57 [Warning] '--skip-locking' is deprecated and will be removed in a future release. Please use '--skip-external-locking' instead.
131012 22:52:57 [Warning] option 'thread_stack': unsigned value 65536 adjusted to 131072
131012 22:52:57 [Note] Plugin 'FEDERATED' is disabled.
InnoDB: The log sequence number in ibdata files does not match
InnoDB: the log sequence number in the ib_logfiles!
131012 22:52:57 InnoDB: Database was not shut down normally!
InnoDB: Starting crash recovery.
InnoDB: Reading tablespace information from the .ibd files...
InnoDB: Restoring possible half-written data pages from the doublewrite
InnoDB: buffer...
131012 22:52:57 InnoDB: Started; log sequence number 6 4110974196
131012 22:52:57 [Note] Event Scheduler: Loaded 0 events
131012 22:52:57 [Note] /usr/local/mysql/bin/mysqld: ready for connections.
Version: '5.1.46' socket: '/tmp/mysql.sock' port: 3306 MySQL Community Server (GPL)
You can download the full log: http://danlee.ca/files/mysql.err.log
This the the my.cnf file:
# Example MySQL config file for small systems.
#
# This is for a system with little memory (<= 64M) where MySQL is only used
# from time to time and it's important that the mysqld daemon
# doesn't use much resources.
#
# You can copy this file to
# /etc/my.cnf to set global options,
# mysql-data-dir/my.cnf to set server-specific options (in this
# installation this directory is /var/db/mysql) or
# ~/.my.cnf to set user-specific options.
#
# In this file, you can use all long options that a program supports.
# If you want to know which options a program supports, run the program
# with the "--help" option.
# The following options will be passed to all MySQL clients
[client]
#password = your_password
port = 3306
socket = /tmp/mysql.sock
# Here follows entries for some specific programs
# The MySQL server
[mysqld]
port = 3306
socket = /tmp/mysql.sock
skip-locking
key_buffer = 16K
max_allowed_packet = 32M
table_cache = 4
sort_buffer_size = 64K
read_buffer_size = 256K
read_rnd_buffer_size = 256K
net_buffer_length = 2K
thread_stack = 64K
#innodb_force_recovery = 3
# Don't listen on a TCP/IP port at all. This can be a security enhancement,
# if all processes that need to connect to mysqld run on the same host.
# All interaction with mysqld must be made via Unix sockets or named pipes.
# Note that using this option without enabling named pipes on Windows
# (using the "enable-named-pipe" option) will render mysqld useless!
#
#skip-networking
server-id = 1
# Uncomment the following if you want to log updates
#log-bin
# Uncomment the following if you are NOT using InnoDB tables
#skip-innodb
# Uncomment the following if you are using InnoDB tables
#innodb_data_home_dir = /var/db/mysql/
#innodb_data_file_path = ibdata1:10M:autoextend
#innodb_log_group_home_dir = /var/db/mysql/
#innodb_log_arch_dir = /var/db/mysql/
# You can set .._buffer_pool_size up to 50 - 80 %
# of RAM but beware of setting memory usage too high
#innodb_buffer_pool_size = 16M
#innodb_additional_mem_pool_size = 2M
# Set .._log_file_size to 25 % of buffer pool size
#innodb_log_file_size = 5M
#innodb_log_buffer_size = 8M
#innodb_flush_log_at_trx_commit = 1
#innodb_lock_wait_timeout = 50
[mysqldump]
quick
max_allowed_packet = 16M
[mysql]
no-auto-rehash
# Remove the next comment character if you are not familiar with SQL
#safe-updates
[isamchk]
key_buffer = 8M
sort_buffer_size = 8M
[myisamchk]
key_buffer = 8M
sort_buffer_size = 8M
[mysqlhotcopy]
interactive-timeout
This is the output of limit:
cputime unlimited
filesize 819200 kbytes
datasize 49152 kbytes
stacksize 49152 kbytes
coredumpsize 0 kbytes
memoryuse 49152 kbytes
vmemoryuse unlimited
descriptors 512
memorylocked 49152 kbytes
maxproc 96
sbsize unlimited
swapsize unlimited
131012 22:52:57 mysqld_safe mysqld restarted
131012 22:52:57 [Warning] '--skip-locking' is deprecated and will be removed in a future release. Please use '--skip-external-locking' instead.
131012 22:52:57 [Warning] option 'thread_stack': unsigned value 65536 adjusted to 131072
131012 22:52:57 [Note] Plugin 'FEDERATED' is disabled.
InnoDB: The log sequence number in ibdata files does not match
InnoDB: the log sequence number in the ib_logfiles!
131012 22:52:57 InnoDB: Database was not shut down normally!
InnoDB: Starting crash recovery.
InnoDB: Reading tablespace information from the .ibd files...
InnoDB: Restoring possible half-written data pages from the doublewrite
InnoDB: buffer...
131012 22:52:57 InnoDB: Started; log sequence number 6 4110974196
131012 22:52:57 [Note] Event Scheduler: Loaded 0 events
131012 22:52:57 [Note] /usr/local/mysql/bin/mysqld: ready for connections.
Version: '5.1.46' socket: '/tmp/mysql.sock' port: 3306 MySQL Community Server (GPL)
You can download the full log: http://danlee.ca/files/mysql.err.log
This the the my.cnf file:
# Example MySQL config file for small systems.
#
# This is for a system with little memory (<= 64M) where MySQL is only used
# from time to time and it's important that the mysqld daemon
# doesn't use much resources.
#
# You can copy this file to
# /etc/my.cnf to set global options,
# mysql-data-dir/my.cnf to set server-specific options (in this
# installation this directory is /var/db/mysql) or
# ~/.my.cnf to set user-specific options.
#
# In this file, you can use all long options that a program supports.
# If you want to know which options a program supports, run the program
# with the "--help" option.
# The following options will be passed to all MySQL clients
[client]
#password = your_password
port = 3306
socket = /tmp/mysql.sock
# Here follows entries for some specific programs
# The MySQL server
[mysqld]
port = 3306
socket = /tmp/mysql.sock
skip-locking
key_buffer = 16K
max_allowed_packet = 32M
table_cache = 4
sort_buffer_size = 64K
read_buffer_size = 256K
read_rnd_buffer_size = 256K
net_buffer_length = 2K
thread_stack = 64K
#innodb_force_recovery = 3
# Don't listen on a TCP/IP port at all. This can be a security enhancement,
# if all processes that need to connect to mysqld run on the same host.
# All interaction with mysqld must be made via Unix sockets or named pipes.
# Note that using this option without enabling named pipes on Windows
# (using the "enable-named-pipe" option) will render mysqld useless!
#
#skip-networking
server-id = 1
# Uncomment the following if you want to log updates
#log-bin
# Uncomment the following if you are NOT using InnoDB tables
#skip-innodb
# Uncomment the following if you are using InnoDB tables
#innodb_data_home_dir = /var/db/mysql/
#innodb_data_file_path = ibdata1:10M:autoextend
#innodb_log_group_home_dir = /var/db/mysql/
#innodb_log_arch_dir = /var/db/mysql/
# You can set .._buffer_pool_size up to 50 - 80 %
# of RAM but beware of setting memory usage too high
#innodb_buffer_pool_size = 16M
#innodb_additional_mem_pool_size = 2M
# Set .._log_file_size to 25 % of buffer pool size
#innodb_log_file_size = 5M
#innodb_log_buffer_size = 8M
#innodb_flush_log_at_trx_commit = 1
#innodb_lock_wait_timeout = 50
[mysqldump]
quick
max_allowed_packet = 16M
[mysql]
no-auto-rehash
# Remove the next comment character if you are not familiar with SQL
#safe-updates
[isamchk]
key_buffer = 8M
sort_buffer_size = 8M
[myisamchk]
key_buffer = 8M
sort_buffer_size = 8M
[mysqlhotcopy]
interactive-timeout
This is the output of limit:
cputime unlimited
filesize 819200 kbytes
datasize 49152 kbytes
stacksize 49152 kbytes
coredumpsize 0 kbytes
memoryuse 49152 kbytes
vmemoryuse unlimited
descriptors 512
memorylocked 49152 kbytes
maxproc 96
sbsize unlimited
swapsize unlimited